Ann Clin Microbiol 2020;23:165-171. Experience at Department of Laboratory Medicine during the COVID-19 Outbreak in Daegu
| Seegene | Ct values for: | Interpretation (1st Ed) | Interpretation (5th Ed) | |||
|---|---|---|---|---|---|---|
| E | RdRp | N | IC | |||
| <40 | <33.5 | <40 | <40 | Positive | Positive | |
| <40 | <33.5 | <40 | ≥40 | Positive | Positive | |
| ≥40 | ≥40 | ≥40 | <40 | Negative | Negative | |
| ≥40 | <33.5 | <40 | ≥40 | Repeat (Seegene) | Repeat after reextraction (Seegene) | |
| <40 | ≥33.5 | <40 | ||||
| <40 | <33.5 | ≥40 | ||||
| ≥40 | ≥33.5 | <40 | ||||
| ≥40 | <33.5 | ≥40 | ||||
| <40 | ≥33.5 | ≥40 | ||||
| ≥40 | ≥33.5 | ≥40 | ||||
| ≥40 | <33.5 | <40 | <40 | Repeat (Seegene+Kogene*) | Repeat after reextraction (Seegene +SD) | |
| <40 | ≥33.5 | <40 | ||||
| <40 | <33.5 | ≥40 | ||||
| ≥40 | ≥33.5 | <40 | ||||
| ≥40 | <33.5 | ≥40 | ||||
| <40 | ≥33.5 | ≥40 | ||||
| SD | Ct values for: | Interpretation | ||||
| E | ORF1ab | IC | ||||
| ≤36 | ≤36 | ≤32 | Positive | |||
| >36 | ≤36 | ≤32 | Same after repeat, Positive | |||
| ≤36 | >36 | ≤32 | Same after repeat, Negative | |||
| >36 | >36 | ≤32 | Negative | |||
| >36 | >36 | >32 | Invalid, repeat | |||
*When the test is repeated with Kogene, positive criteria for RdRp gene is ≤35.
Abbreviations: Ct, cycle of threshold; E, envelope gene; RdRp, RNA-dependent RNA polymerase gene; N, nucleocapsid gene; IC, internal control; ORF, open-reading frame gene.